###
### Thu Jun 30 17:44:02 EDT 2005:
### /usr/pkg/bin/bmake bulk-package for mummer-3.15nb1
### Current pkg count:  2 installed packages: digest-20050323 lucy-1.18p
###
BULK> Full rebuild in progress...
BULK> Cleaning package mummer-3.15nb1 and pre-requisite packages
===> Cleaning for mummer-3.15nb1
===> Cleaning for gmake-3.80nb4
===> Cleaning for gettext-lib-0.11.5nb4
===> Cleaning for libiconv-1.9.2nb1
===> Cleaning for libtool-base-1.5.18nb3
===> Cleaning for pkg_install-info-4.5nb3
===> Cleaning for perl-5.8.6nb4
BULK> Removing installed packages which are not needed to build mummer-3.15nb1
BULK> Keeping BULK_PREREQ: digest-20050323 (pkgtools/digest)
/usr/pkg/sbin/pkg_delete -K /var/db/pkg -r lucy-1.18p
BULK> Installing packages which are required to build mummer-3.15nb1.
BULK>  /usr/pkg/sbin/pkg_add -K /var/db/pkg  /packages/SunOS-5.8/sparc/All/gmake-3.80nb4.tgz
===========================================================================
Installing files needed by libiconv-1.9.2nb1:

	/usr/pkg/lib/charset.alias
	    [/usr/pkg/share/examples/libiconv/charset.alias]

===========================================================================
BULK> Required package gettext-lib-0.11.5nb4 (devel/gettext-lib) is already installed
BULK> Required package libiconv-1.9.2nb1 (converters/libiconv) is already installed
BULK>  /usr/pkg/sbin/pkg_add -K /var/db/pkg  /packages/SunOS-5.8/sparc/All/libtool-base-1.5.18nb3.tgz
BULK> Required package pkg_install-info-4.5nb3 (pkgtools/pkg_install-info) is already installed
BULK>  /usr/pkg/sbin/pkg_add -K /var/db/pkg  /packages/SunOS-5.8/sparc/All/perl-5.8.6nb4.tgz

===========================================================================
$NetBSD: MESSAGE,v 1.1 2004/01/08 19:18:00 jlam Exp $

perl-5.8.6nb4 will use the following directory as the default
location of the site-specific Perl modules:

	/usr/pkg/lib/perl5/site_perl/5.8.6

===========================================================================

BULK> Required package digest-20050323 (pkgtools/digest) is already installed
/usr/pkg/bin/bmake package (mummer-3.15nb1)
===> Checking for vulnerabilities in mummer-3.15nb1
=> Checksum SHA1 OK for MUMmer3.15.tar.gz.
=> Checksum RMD160 OK for MUMmer3.15.tar.gz.
work -> /pkgobj/biology/mummer/work
===> Extracting for mummer-3.15nb1
===> Required installed package {perl>=5.0,perl-thread>=5.0}: perl-5.8.6nb4 found
===> Required installed package perl>=5.8.5nb6: perl-5.8.6nb4 found
===> Required installed package gmake>=3.78: gmake-3.80nb4 found
===> Patching for mummer-3.15nb1
===> Applying pkgsrc patches for mummer-3.15nb1
===> Overriding tools for mummer-3.15nb1
===> Creating toolchain wrappers for mummer-3.15nb1
===> Configuring for mummer-3.15nb1
===> Building for mummer-3.15nb1
cd /pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz; /usr/pkg/bin/gmake mummer
gmake[1]: Entering directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz'
cd libbasedir; /usr/pkg/bin/gmake libbase.a
gmake[2]: Entering directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz/libbasedir'
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o cleanMUMcand.o cleanMUMcand.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o clock.o clock.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o mapfile.o mapfile.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o multiseq.o multiseq.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o procopt.o procopt.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o safescpy.o safescpy.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o seterror.o seterror.c
cc -O -I/usr/pkg/include -I/usr/pkg/include  -c -o space.o space.c
ar sruv libbase.a cleanMUMcand.o clock.o mapfile.o multiseq.o procopt.o safescpy.o seterror.o space.o
ar: creating libbase.a
ar: writing libbase.a
a - cleanMUMcand.o
a - clock.o
a - mapfile.o
a - multiseq.o
a - procopt.o
a - safescpy.o
a - seterror.o
a - space.o
gmake[2]: Leaving directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz/libbasedir'
cd streesrc; /usr/pkg/bin/gmake libstree.a
gmake[2]: Entering directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz/streesrc'
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o construct.o construct.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o access.o access.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o scanpref.o scanpref.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o linkloc.o linkloc.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o depthtab.o depthtab.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o ex2leav.o ex2leav.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o dfs.o dfs.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o overmax.o overmax.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o oversucc.o oversucc.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o addleafcount.o addleafcount.c
cc -I../libbasedir -DSTREEHUGE -I/usr/pkg/include  -c -o iterator.o iterator.c
ar sruv libstree.a construct.o access.o scanpref.o linkloc.o depthtab.o ex2leav.o dfs.o overmax.o oversucc.o addleafcount.o iterator.o
ar: creating libstree.a
ar: writing libstree.a
a - construct.o
a - access.o
a - scanpref.o
a - linkloc.o
a - depthtab.o
a - ex2leav.o
a - dfs.o
a - overmax.o
a - oversucc.o
a - addleafcount.o
a - iterator.o
gmake[2]: Leaving directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz/streesrc'
cd mm3src; /usr/pkg/bin/gmake mummer
gmake[2]: Entering directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz/mm3src'
cc -I../libbasedir -I../streesrc -I/usr/pkg/include  -c -o maxmat3.o maxmat3.c
cc -I../libbasedir -I../streesrc -I/usr/pkg/include  -c -o maxmatopt.o maxmatopt.c
cc -I../libbasedir -I../streesrc -I/usr/pkg/include  -c -o maxmatinp.o maxmatinp.c
cc -I../libbasedir -I../streesrc -I/usr/pkg/include  -c -o findmumcand.o findmumcand.c
cc -I../libbasedir -I../streesrc -I/usr/pkg/include  -c -o findmaxmat.o findmaxmat.c
cc -I../libbasedir -I../streesrc -I/usr/pkg/include  -c -o procmaxmat.o procmaxmat.c
cc -L/usr/pkg/lib -R/usr/pkg/lib maxmat3.o maxmatopt.o maxmatinp.o findmumcand.o findmaxmat.o procmaxmat.o ../streesrc/libstree.a ../libbasedir/libbase.a\
-o /pkgobj/biology/mummer/work/MUMmer3.15/mummer; chmod 755 /pkgobj/biology/mummer/work/MUMmer3.15/mummer
gmake[2]: Leaving directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz/mm3src'
gmake[1]: Leaving directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/kurtz'
cd /pkgobj/biology/mummer/work/MUMmer3.15/src/tigr; /usr/pkg/bin/gmake all
gmake[1]: Entering directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/tigr'
CC -I/usr/pkg/include tigrinc.cc -c -o tigrinc.o
"tigrinc.hh", line 33: Error: "," expected instead of "*".
"tigrinc.hh", line 38: Error: Operand expected instead of ",".
"tigrinc.hh", line 38: Error: There must be an identifier to declare.
"tigrinc.hh", line 38: Error: There must be an identifier to declare.
"tigrinc.hh", line 38: Error: No direct declarator preceding "[".
"tigrinc.hh", line 38: Error: A declaration does not specify a tag or an identifier.
"tigrinc.hh", line 38: Error: Use ";" to terminate declarations.
"tigrinc.hh", line 38: Error: A declaration was expected instead of ")".
"tigrinc.cc", line 4: Error: Multiple declaration for FILE.
"tigrinc.cc", line 4: Error: "," expected instead of "*".
"tigrinc.cc", line 12: Error: Filename is not defined.
"tigrinc.cc", line 12: Error: Mode is not defined.
"tigrinc.cc", line 13: Error: A declaration was expected instead of "if".
"tigrinc.cc", line 13: Error: No direct declarator preceding "(".
"tigrinc.cc", line 17: Error: A declaration was expected instead of "}".
"tigrinc.cc", line 19: Error: A declaration was expected instead of "return".
"tigrinc.cc", line 19: Error: Multiple declaration for fp.
"tigrinc.cc", line 20: Error: A declaration was expected instead of "}".
"tigrinc.cc", line 32: Error: The function "calloc" must have a prototype.
"tigrinc.cc", line 35: Error: The function "fprintf" must have a prototype.
"tigrinc.cc", line 37: Error: Only a function may be called.
"tigrinc.cc", line 53: Error: The function "malloc" must have a prototype.
"tigrinc.cc", line 56: Error: The function "fprintf" must have a prototype.
"tigrinc.cc", line 58: Error: Only a function may be called.
"tigrinc.cc", line 74: Error: The function "realloc" must have a prototype.
Compilation aborted, too many Error messages.
gmake[1]: *** [tigrinc.o] Error 1
gmake[1]: Leaving directory `/pkgobj/biology/mummer/work/MUMmer3.15/src/tigr'
gmake: *** [tigr] Error 2
*** Error code 2

Stop.
bmake: stopped in /usr/pkgsrc/biology/mummer
===> 
===> There was an error during the ``build'' phase.
===> Please investigate the following for more information:
===>      * log of the build
===>      * /pkgobj/biology/mummer/work/.work.log
===> 
*** Error code 1

Stop.
bmake: stopped in /usr/pkgsrc/biology/mummer

Please view the work log for mummer-3.15nb1

BULK> mummer-3.15nb1 was marked as broken:
-rw-r--r--   1 root     other       9061 Jun 30 17:46 .broken.html
/usr/pkg/bin/bmake deinstall
===> Deinstalling for mummer
BULK> Marking all packages which depend upon mummer-3.15nb1 as broken:
BULK> Build for mummer-3.15nb1 was not successful, aborting.